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Crash mid run of a small DB #2450

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Dmorgen opened this issue Dec 12, 2024 · 5 comments · Fixed by #2453
Closed

Crash mid run of a small DB #2450

Dmorgen opened this issue Dec 12, 2024 · 5 comments · Fixed by #2453

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@Dmorgen
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Dmorgen commented Dec 12, 2024

Hi,

please see the attached crash log. the data is from a sample from teeth, searched against a small protein dataset, with GPTMD followed by the search. the search stage crashed.

Thanks!
David.

results.txt

@trishorts
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are you willing to let us have a go?

@Dmorgen
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Dmorgen commented Dec 12, 2024

sure. I will prepare a folder in the box

@trishorts
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maybe the raw file is still loading?
i see fasta only

@trishorts
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working on fix here: #2453
Bug created by attempted addition of modification to a peptidewithsetmods that already had a modification at the same position

@Dmorgen
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Dmorgen commented Dec 13, 2024 via email

@nbollis nbollis linked a pull request Dec 16, 2024 that will close this issue
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2 participants