Require More Evidence to Write mod to Pruned Database

[nbollis]

PR Summary

This pull request introduces new features for handling pruned databases and generalizes terminology to support a broader range of biopolymers.

• DictionaryExtensions.cs: Introduced DictionaryExtensions class with AddOrCreate method.
• PrunedDatabaseWriter.cs: Added static class for writing modification-annotated databases asynchronously and handle the switch between RNA and Protein.
• PostSearchAnalysisTask.cs: Generalized terminology from "peptide" to "bioPolymer" and methods for pruned database construction.
• Program.cs and MainWindow.xaml.cs: Added event handler for PrunedDatabaseWriter.FinishedWritingFileHandler.
• SearchTaskWindow.xaml and SearchTaskWindow.xaml.cs: Added UI elements and bindings for pruned database settings.

This is an experimental branch. The database writing by more evidence does not necessarily need to go into MetaMorpheus. This PR was posted to allow Claire to get an artifact. Incorporation into the main branch can wait until the utility of such a method has been validated.

[codecov]

Codecov Report

Attention: Patch coverage is 88.97059% with 30 lines in your changes missing coverage. Please review.

Project coverage is 93.85%. Comparing base (fee5a0c) to head (fc6a5e5).

Files with missing lines	Patch %	Lines
...eus/TaskLayer/SearchTask/PostSearchAnalysisTask.cs	86.42%	21 Missing and 9 partials ⚠️

Additional details and impacted files

@@            Coverage Diff             @@
##           master    #2444      +/-   ##
==========================================
+ Coverage   93.81%   93.85%   +0.03%     
==========================================
  Files         141      143       +2     
  Lines       22002    22079      +77     
  Branches     3015     3029      +14     
==========================================
+ Hits        20642    20723      +81     
+ Misses        910      906       -4     
  Partials      450      450              

Files with missing lines	Coverage Δ
...aMorpheus/EngineLayer/Util/DictionaryExtensions.cs	100.00% <100.00%> (ø)
...heus/TaskLayer/SearchTask/PrundedDatabaseWriter.cs	100.00% <100.00%> (ø)
...aMorpheus/TaskLayer/SearchTask/SearchParameters.cs	100.00% <100.00%> (ø)
...eus/TaskLayer/SearchTask/PostSearchAnalysisTask.cs	94.34% <86.42%> (+0.37%)	⬆️