Skip to content

Commit

Permalink
fix readme images in pypi
Browse files Browse the repository at this point in the history
  • Loading branch information
justjhong committed Oct 5, 2020
1 parent 1430838 commit 337e560
Show file tree
Hide file tree
Showing 3 changed files with 5 additions and 4 deletions.
1 change: 1 addition & 0 deletions .gitignore
Original file line number Diff line number Diff line change
@@ -1,6 +1,7 @@
# setup.py files
MANIFEST
dist
rnasieve.egg-info

# Mac files
.DS_Store
Expand Down
4 changes: 2 additions & 2 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@

RNA-Sieve is a method for the deconvolution of bulk cell samples via single-cell RNA expression data.

![RNA-sieve-viz](readme_figures/deconvolution_plot_3d.png)
![RNA-sieve-viz](https://raw.githubusercontent.com/songlab-cal/rna-sieve/v_0_1_1/readme_figures/deconvolution_plot_3d.png)

## Associated Work
Our preprint is currently available at [https://www.biorxiv.org/content/10.1101/2020.10.01.322867v1](https://www.biorxiv.org/content/10.1101/2020.10.01.322867v1).
Expand All @@ -21,7 +21,7 @@ $ pip3 install rna-sieve

## Example Usage

![muscle-FD-example](readme_figures/muscle_age_FD.png)
![muscle-FD-example](https://raw.githubusercontent.com/songlab-cal/rna-sieve/v_0_1_1/readme_figures/muscle_age_FD.png)

For example usage, please reference [the example Jupyter notebook](https://github.com/songlab-cal/rna-sieve/blob/master/examples/example.ipynb) for Python 3 usage,
or [the Mathematica notebook](https://github.com/songlab-cal/rna-sieve/blob/master/mathematica/rnasieve.nb) for Mathematica usage.
Expand Down
4 changes: 2 additions & 2 deletions setup.py
Original file line number Diff line number Diff line change
Expand Up @@ -7,15 +7,15 @@
setup(
name='rnasieve',
packages=['rnasieve'],
version='0.1.1',
version='0.1.2',
license='GPL',
description='A library for the statistical deconvolution of RNA bulk samples with single-cell references.',
long_description=long_description,
long_description_content_type='text/markdown',
author='Justin Hong',
author_email='[email protected]',
url='https://github.com/songlab-cal/rna-sieve',
download_url='https://github.com/songlab-cal/archive/v_0_1_1.tar.gz',
download_url='https://github.com/songlab-cal/archive/v_0_1_2.tar.gz',
keywords=[
'rna',
'deconvolution',
Expand Down

0 comments on commit 337e560

Please sign in to comment.