update makefile

CMakeLists.txt

@@ -11,7 +11,7 @@ set(CMAKE_EXPORT_COMPILE_COMMANDS ON)
 set(CLANG_ENABLE_STATIC_ANALYZER ON)
 set(LLVM_ENABLE_PROJECTS "clang;clang-tools-extra;compiler-rt;llvm-spirv;sycl;libclc")
 set(LLVM_ENABLE_RUNTIMES "libcxx;libcxxabi")
-
+set(CMAKE_CXX_FLAGS " -D_GLIBCXX_USE_TBB_PAR_BACKEND=0 -fsanitize=address,leak,undefined -Wno-narrowing -fsanitize-recover=all -g -O0" )
 # Add the cmake folder so the FindSphinx module is found
 set(CMAKE_MODULE_PATH "${PROJECT_SOURCE_DIR}/cmake" ${CMAKE_MODULE_PATH})
 
@@ -28,12 +28,12 @@ set(THREADS_PREFER_PTHREAD_FLAG ON) # This is just for us, we do prefer pthreads
 # Create Documentation 
 add_subdirectory("nrgcore")
 add_subdirectory("docs")
-add_subdirectory("examples/rgflowSIAM")
+# add_subdirectory("examples/rgflowSIAM")
 #add_subdirectory("examples/entropySIAM")
 # add all sub directories .. 
-# file(GLOB V_GLOB LIST_DIRECTORIES true "examples/*")
-# foreach(item ${V_GLOB})
-# 	if(IS_DIRECTORY ${item})
-# 		add_subdirectory(${item})
-# 	endif()
-# endforeach()
+file(GLOB V_GLOB LIST_DIRECTORIES true "examples/*")
+foreach(item ${V_GLOB})
+	if(IS_DIRECTORY ${item})
+		add_subdirectory(${item})
+	endif()
+endforeach()

docs/build.rst

@@ -30,7 +30,7 @@ Ubuntu/Debian based Linux OS
 -----------------------------------
 Here is a list commands for to install the dependencies.
 
-  .. code-block:: python
+  .. code-block:: bash 
 
     sudo apt-get update 
     sudo apt-get install sphinx-doc doxygen graphviz libhdf5-dev --yes

makefile

@@ -6,7 +6,7 @@ build:
 	rm -rf build 
 	mkdir build
 	# Clang for debug
-	cmake  -G Ninja -DCMAKE_EXPORT_COMPILE_COMMANDS=TRUE -Bbuild -DCMAKE_CXX_FLAGS="  -D_GLIBCXX_USE_TBB_PAR_BACKEND=0 -fsanitize=address,leak,undefined -Wno-narrowing -fsanitize-recover=all -g -O0"  -DCMAKE_CXX_COMPILER=clang++  -DCMAKE_C_COMPILER=clang .
+	cmake  -G Ninja -Bbuild  -DCMAKE_CXX_COMPILER=clang++  -DCMAKE_C_COMPILER=clang .
 	# GCC 
 	#cmake  -G Ninja -DCMAKE_EXPORT_COMPILE_COMMANDS=TRUE -Bbuild -DCMAKE_CXX_FLAGS="  -D_GLIBCXX_USE_TBB_PAR_BACKEND=0 -fsanitize=address,leak,undefined -Wno-narrowing -fsanitize-recover=all -g -O0"  -DCMAKE_CXX_COMPILER=g++  .
 	# Intel Compiler