solve conda env issue

theislab · Nov 9, 2023 · 9f809e6 · 9f809e6
1 parent 6646ab3
commit 9f809e6
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/modules/hash_demulti/demuxem.nf b/modules/hash_demulti/demuxem.nf
@@ -5,7 +5,7 @@ process demuxem{
     publishDir "$projectDir/$params.outdir/$sampleId/$params.mode/hash_demulti/demuxem", mode:'copy'
     label 'small_mem'
 
-    conda "python bioconda::pegasuspy pandas scanpy demuxEM"
+    conda "bioconda::pegasuspy bioconda::scanpy bioconda::demuxEM" 
 
     input:
         tuple val(sampleId), path(raw_hto_matrix_dir, stageAs: "hto_data_${params.hto_matrix_demuxem}"),