Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Add feature correlation example #72

Open
wants to merge 5 commits into
base: main
Choose a base branch
from

Conversation

ArinaDanilina
Copy link
Collaborator

No description provided.

Copy link

Check out this pull request on  ReviewNB

See visual diffs & provide feedback on Jupyter Notebooks.


Powered by ReviewNB

@@ -0,0 +1,306 @@
{
Copy link
Collaborator

@MUCDK MUCDK May 20, 2024

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

add a description what you are doing here. Didn't we send you what we did for the paper? i.e. the correlation for the push-forward distribution?


Reply via ReviewNB

@ArinaDanilina ArinaDanilina requested a review from MUCDK July 11, 2024 10:57
@@ -0,0 +1,716 @@
{
Copy link
Collaborator

@MUCDK MUCDK Jul 30, 2024

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

This is wrong. We don't compute feature corr. between time points, but between push-forward/pull-back distr, and the expression.

Also what you did here I don't get.


Reply via ReviewNB

@@ -0,0 +1,716 @@
{
Copy link
Collaborator

@MUCDK MUCDK Jul 30, 2024

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

make it more descriptive. is it target genes? driver genes?

add more descriptions,


Reply via ReviewNB

@@ -0,0 +1,716 @@
{
Copy link
Collaborator

@MUCDK MUCDK Jul 30, 2024

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

What does this mean? do we know anything about these genes?


Reply via ReviewNB

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants