Parse multiple Antimicrobial Resistance Analysis Reports into a common data structure

A python framework for microbial natural products data mining by integrating genomics and metabolomics data

Python implementation of Combat for data harmonisation, allowing also to remove unwanted effects

This is the DataHarmonizer spreadsheet web application bundled with pathogen genomics data entry and validation templates

The Harmony Python library: a research tool for psychologists to harmonise data and questionnaire items. Open source.

Self-hostable, open-source engine for reproducible data harmonization, dataset building & exploration

A Python toolkit for biomedical data integration

Python library for intelligent data stewardship using Large Language Model (LLM) embeddings

AD & PD cohort variable distributions

Code and sample data for McGregor et al., 2024

Intelligent data steward toolbox using Large Language Model embeddings for automated Data-Harmonization

International Physical Activity Questionnaire (IPAQ) variables

Visualizing demographic evolution using geographically inconsistent census data

This is the source code for the Harmony project REST API

Miscellaneous codes for spatial mapping and raster data manipulation

Example Jupyter notebook and R scripts using Harmony in real research problems

Proof-of-concept for storing and querying harmonized AMR Genomic Analysis Results in datahike