Merge pull request #201 from benjeffery/longer_name #228
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name: Tests | |
on: | |
pull_request: | |
push: | |
branches: [main, test] | |
jobs: | |
pre-commit: | |
name: Lint | |
runs-on: ubuntu-latest | |
steps: | |
- name: Cancel Previous Runs | |
uses: styfle/[email protected] | |
with: | |
access_token: ${{ github.token }} | |
- uses: actions/checkout@v3 | |
- uses: actions/setup-python@v4 | |
with: | |
python-version: '3.11' | |
- uses: pre-commit/[email protected] | |
test: | |
name: Python | |
runs-on: ${{ matrix.os }} | |
strategy: | |
fail-fast: false | |
matrix: | |
python: [ "3.11" ] | |
os: [ ubuntu-latest, ] | |
defaults: | |
run: | |
shell: bash | |
steps: | |
- name: Cancel Previous Runs | |
uses: styfle/[email protected] | |
with: | |
access_token: ${{ github.token }} | |
- name: Checkout | |
uses: actions/checkout@v3 | |
- uses: actions/setup-python@v4 | |
with: | |
python-version: '3.11' | |
cache: 'pip' | |
- name: Install deps | |
run: pip install -r requirements.txt | |
- name: Tests with numba | |
run: coverage run --source=tsbrowse -m pytest -x tests | |
- name: Tests with coverage (no numba) | |
run: TSBROWSE_DISABLE_NUMBA=1 coverage run --source=tsbrowse -m pytest -x tests | |
- name: Upload coverage | |
env: | |
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
run: | | |
coveralls --service=github |