Merge pull request #205 from benjeffery/pyproject

Consolidate to pyproject.toml

.github/workflows/tests.yml

@@ -47,8 +47,8 @@ jobs:
 
       - name: Install deps
         run: |
-          pip install -r requirements.txt
-          playwright install
+            pip install -r requirements.txt
+            playwright install
 
       - name: Tests with numba
         run: coverage run --source=tsbrowse -m pytest -x tests
@@ -60,4 +60,14 @@ jobs:
         env:
           GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
         run: |
-          coveralls --service=github
+          coveralls --service=github
+
+
+  
+      - name: Build wheel
+        run: python -m build --wheel
+
+      - name: Install wheel
+        run: |
+          pip install dist/*.whl
+          python -m tsbrowse --help

pyproject.toml

@@ -1,3 +1,45 @@
 [build-system]
-requires = ["setuptools"]
+requires = ["setuptools>=45", "setuptools_scm[toml]>=6.2"]
 build-backend = "setuptools.build_meta"
+
+[project]
+name = "tsbrowse"
+authors = [
+    {name = "Tskit Developers", email = "[email protected]"},
+]
+description = "Webapp to view and visualise tskit ARGs"
+readme = "README.md"
+requires-python = ">=3.8"
+license = {text = "MIT"}
+classifiers = [
+    "Intended Audience :: Science/Research",
+    "License :: OSI Approved :: MIT License",
+    "Programming Language :: Python :: 3",
+    "Topic :: Scientific/Engineering",
+    "Topic :: Scientific/Engineering :: Bio-Informatics",
+]
+dependencies = [
+    "click",
+    "daiquiri",
+    "panel",
+    "hvplot",
+    "datashader",
+    "tskit",
+    "tszip",
+]
+dynamic = ["version"]
+keywords = ["tree sequence", "ancestral recombination graph", "tskit", "quality control"]
+
+[project.urls]
+"Bug Tracker" = "https://github.com/tskit-dev/tsbrowse/issues"
+"Source Code" = "https://github.com/tskit-dev/tsbrowse"
+Homepage = "https://tskit.dev/tsbrowse/"
+
+[tool.setuptools]
+packages = ["tsbrowse", "tsbrowse.pages"]
+
+[tool.setuptools_scm]
+write_to = "tsbrowse/_version.py"
+
+[tool.pytest]
+testpaths = ["tests"]

requirements.txt

@@ -1,3 +1,4 @@
+build
 click
 coverage
 coveralls