patientGGIR

patientGGIR is an R package to help generate patient reports from the output of R package GGIR.

Installation

• Install: https://miktex.org/download

• When installing on Windows:

  • Inside Miktex Console
  • Inside MikTex and under package, find tabu.
  • Click it, and press the "plus" to install it

• Inside RStudio:

install.packages(pkgs = "remotes",  dependencies = TRUE)
remotes::install_github("wadpac/patientGGIR", dependencies = TRUE)

Usage

• Run GGIR as you normally do

• Specify path to GGIR output folder, e.g.

creatReport(GGIRoutputdir = "C:/output_pilot",
            lang = "fr",
            idsep = "_",
            desiredtz = "Europe/Paris",
            type = "onepage_luxsleepactcr_A4")
          

Notes:

• lang is the language, with options fr or en
• idsep is the separator for participant id in the file name, e.g. from 12_0872.bin the code will extract 12.
• desiredtz is the desired timezone in which data collection took place
• type is the type of report, currently only one report type facilitated