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DESCRIPTION
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DESCRIPTION
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Package: terraTCGAdata
Type: Package
Title: OpenAccess TCGA Data on Terra as MultiAssayExperiment
Version: 1.11.0
Authors@R: person(
"Marcel", "Ramos", , "[email protected]",
c("aut", "cre"), c(ORCID = "0000-0002-3242-0582")
)
Description: Leverage the existing open access TCGA data on Terra with
well-established Bioconductor infrastructure. Make use of the Terra
data model without learning its complexities. With a few functions,
you can copy / download and generate a MultiAssayExperiment from the
TCGA example workspaces provided by Terra.
Depends: AnVILGCP, MultiAssayExperiment
biocViews: Software, Infrastructure, DataImport
Imports:
AnVIL,
BiocFileCache,
dplyr,
GenomicRanges,
methods,
RaggedExperiment,
readr,
S4Vectors,
stats,
tidyr,
TCGAutils,
utils
Suggests:
AnVILBase,
knitr,
rmarkdown,
BiocStyle,
withr,
testthat (>= 3.0.0)
URL: https://github.com/waldronlab/terraTCGAdata
BugReports: https://github.com/waldronlab/terraTCGAdata/issues
VignetteBuilder: knitr
License: Artistic-2.0
Encoding: UTF-8
RoxygenNote: 7.3.2
Config/testthat/edition: 3
Date: 2024-08-22