Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Finngen #69

Open
wants to merge 7 commits into
base: master-gene
Choose a base branch
from
Open

Finngen #69

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
7 commits
Select commit Hold shift + click to select a range
0896146
fixed indentation
juhis Jan 23, 2019
4fa8012
allow gzipped pheno file
juhis Jan 23, 2019
0d69329
remove covariates in case of perfect separation
juhis Jan 23, 2019
cd377e8
reduce null model size by removing hidden environments
juhis Jan 23, 2019
ca022ba
don't analyze variant if ac == 0
juhis Jan 23, 2019
ef84160
removed unnecessary 3rd party stuff
juhis Jan 23, 2019
46e5cec
merge to master-gene
weizhouUMICH Jan 27, 2019
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
The table of contents is too big for display.
Diff view
Diff view
  •  
  •  
  •  
The diff you're trying to view is too large. We only load the first 3000 changed files.
772 changes: 385 additions & 387 deletions R/SAIGE_SPATest.R
View file
Open in desktop

Large diffs are not rendered by default.

1,972 changes: 1,018 additions & 954 deletions R/SAIGE_fitGLMM_fast.R
View file
Open in desktop

Large diffs are not rendered by default.

Binary file modified src/SAIGE.so
View file
Open in desktop
Binary file not shown.
3 changes: 0 additions & 3 deletions thirdParty/bgen/.hgignore
View file
Open in desktop

This file was deleted.

1 change: 0 additions & 1 deletion thirdParty/bgen/.hgtags
View file
Open in desktop

This file was deleted.

9 changes: 0 additions & 9 deletions thirdParty/bgen/.lock-waf_linux2_build
View file
Open in desktop

This file was deleted.

Loading