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image: gitpod/workspace-base | ||
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tasks: | ||
- name: install mamba | ||
- name: install gfastats | ||
command: | | ||
curl -L -O "https://github.com/conda-forge/miniforge/releases/latest/download/Mambaforge-$(uname)-$(uname -m).sh" | ||
bash Mambaforge-$(uname)-$(uname -m).sh -b -p /workspace/conda && rm Mambaforge-$(uname)-$(uname -m).sh | ||
/workspace/conda/bin/mamba init bash | ||
source ${HOME}/.bashrc | ||
vscode: | ||
extensions: | ||
- anwar.papyrus-pdf | ||
cd /workspace | ||
wget https://github.com/vgl-hub/gfastats/releases/download/v1.3.6/gfastats.v1.3.6-linux.zip | ||
unzip gfastats.v1.3.6-linux.zip | ||
workspaceLocation: "/workspace" |