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v2.5.3

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@ch4rr0 ch4rr0 released this 17 Jan 03:50
· 20 commits to master since this release

Version 2.5.3 - Jan 16, 2024

  • Fixed an issue causing bowtie2's memory usage to increase over time.
  • Fixed an issue causing bowtie2 to crash when processing empty FASTQ records.
  • Fixed an issue that would cause bowtie2 to erroneously treat -f and -F as mutually exclusive.
  • Add optional support for libsais to bowtie2-build for faster index building.
    N.B. -- small indexes are capped at 2GB when using libsais as opposed to 4GB when using the
    default blockwise algorithm. See MANUAL for more details.