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Biobix

UGENT LAB OF BIOINFORMATICS AND COMPUTATIONAL GENOMICS

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  1. proteoformer proteoformer Public

    Integration ribosome profiling - mass spectrometry

    Python 14 8

  2. DeepRibo DeepRibo Public

    Python 14 4

  3. mQC mQC Public

    Ribosome profiling mapping quality control tool

    Python 6 2

  4. REPARATION REPARATION Public

    Perl 1 5

  5. proBAMconvert proBAMconvert Public

    proBAMconvert, a conversion tool for peptide identification files (MzIdentML,pepXML,mzTAB) to the proBAM format

    Python 4

  6. mQC_galaxy mQC_galaxy Public

    Repo for the files needed for embedding mappingQC in the Galaxy environment

    HTML

Repositories

Showing 10 of 11 repositories
  • proteoformer Public

    Integration ribosome profiling - mass spectrometry

    Biobix/proteoformer’s past year of commit activity
    Python 14 GPL-3.0 8 2 0 Updated Dec 16, 2024
  • BIOCLOCK Public

    Code used for the BIOCLOCK pilot study.

    Biobix/BIOCLOCK’s past year of commit activity
    R 0 GPL-3.0 0 0 0 Updated Dec 6, 2024
  • maelstRom Public
    Biobix/maelstRom’s past year of commit activity
    R 0 AGPL-3.0 0 0 0 Updated Nov 27, 2024
  • DeepRibo Public
    Biobix/DeepRibo’s past year of commit activity
    Python 14 GPL-3.0 4 1 0 Updated Feb 27, 2023
  • mQC Public

    Ribosome profiling mapping quality control tool

    Biobix/mQC’s past year of commit activity
    Python 6 GPL-3.0 2 1 0 Updated Apr 20, 2021
  • proBAMconvert Public

    proBAMconvert, a conversion tool for peptide identification files (MzIdentML,pepXML,mzTAB) to the proBAM format

    Biobix/proBAMconvert’s past year of commit activity
    Python 0 4 1 1 Updated Mar 30, 2021
  • REPARATION Public
    Biobix/REPARATION’s past year of commit activity
    Perl 1 GPL-3.0 5 0 0 Updated Dec 4, 2020
  • MAGE_preprocessing Public
    Biobix/MAGE_preprocessing’s past year of commit activity
    Python 0 0 0 0 Updated Sep 3, 2019
  • mQC_galaxy Public

    Repo for the files needed for embedding mappingQC in the Galaxy environment

    Biobix/mQC_galaxy’s past year of commit activity
    HTML 0 0 0 0 Updated Mar 8, 2018
  • RiboZINB Public

    RiboZinB: A tool to identifying actively translated isoform(s) from ribosome profiling data.

    Biobix/RiboZINB’s past year of commit activity
    Perl 0 1 0 0 Updated Feb 8, 2018
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