Onboard Marshall Island to UP

prime-router/metadata/json_schema/organizations/organizations.json

@@ -557,6 +557,7 @@
         "HAWAII",
         "EAST_INDIANA",
         "INDIANA_STARKE",
+        "MAJURO",
         "MICHIGAN",
         "CHAMORRO",
         "UTC",

prime-router/settings/STLTs/MH/rmi-doh.yml

@@ -1,3 +1,4 @@
+---
 - name: "rmi-doh"
   description: "Marshall Island Health Informatics Department"
   jurisdiction: "STATE"
@@ -13,7 +14,7 @@
       topic: "full-elr"
       customerStatus: "active"
       translation:
-        schemaName: "azure:/metadata/hl7_mapping/receivers/STLTs/MH/MH-receiver-transform.yml"
+        schemaName: "azure:/hl7_mapping/receivers/STLTs/MH/MH-receiver-transform.yml"
         useTestProcessingMode: false
         useBatchHeaders: true
         receivingApplicationName: "RMI_DOH"
@@ -49,7 +50,7 @@
         receivingOrganization: null
         convertPositiveDateTimeOffsetToNegative: false
         stripInvalidCharsRegex: null
-        convertDateTimesToReceiverLocalTime: false
+        convertDateTimesToReceiverLocalTime: true
         useHighPrecisionHeaderDateTimeFormat: false
         type: "HL7"
         truncationConfig:
@@ -69,8 +70,9 @@
       processingModeFilter: []
       reverseTheQualityFilter: false
       conditionFilter:
-        # Accept COVID only
-        - "(%resource.code.coding.extension('https://reportstream.cdc.gov/fhir/StructureDefinition/condition-code').value.where(code  in ('840539006')).exists())"
+        # RSV: 55735004, COVID: 840539006 (Antigen) | 895448002 - Antibody result, FLU (A or B by Antigen): 6142004, FLU (A or B by Culture and Identification Method): 541131000124102.
+        # Multiplex (All),
+        - "(%resource.code.coding.extension('https://reportstream.cdc.gov/fhir/StructureDefinition/condition-code').value.where(code in ('55735004'|'6142004'|'840539006'|'895448002'|'541131000124102')).exists())"
       mappedConditionFilter: []
       deidentify: false
       deidentifiedValue: ""
@@ -91,6 +93,7 @@
         filePath: ./upload
         credentialName: DEFAULT-SFTP
       externalName: null
-      enrichmentSchemaNames: []
-      timeZone: null
+      enrichmentSchemaNames:
+        - "azure:/fhir_transforms/common/datetime-to-local/datetime-to-local-majuro.yml"
+      timeZone: "MAJURO"
       dateTimeFormat: "OFFSET"

prime-router/src/testIntegration/resources/datatests/FHIR_to_HL7/sample_MH_20241226-0001.fhir

@@ -0,0 +1 @@
+{	"resourceType": "Bundle",	"identifier": {		"value": "0bab3f94-feb4-4915-939d-1adc5da201f3"	},	"type": "message",	"timestamp": "2024-06-05T18:55:01.277Z",	"entry": [		{			"fullUrl": "MessageHeader/5cbae40a-675e-49d4-b12a-04271de671a6",			"resource": {				"resourceType": "MessageHeader",				"id": "5cbae40a-675e-49d4-b12a-04271de671a6",				"meta": {					"tag": [						{							"system": "http://terminology.hl7.org/CodeSystem/v2-0103",							"code": "P",							"display": "Production"						}					]				},				"eventCoding": {					"system": "http://terminology.hl7.org/CodeSystem/v2-0003",					"code": "R01",					"display": "ORU/ACK - Unsolicited transmission of an observation message"				},				"destination": [					{						"name": "PRIME ReportStream",						"endpoint": "https://prime.cdc.gov/api/reports?option=SkipInvalidItems"					}				],				"sender": {					"reference": "Organization/719ec8ad-cf59-405a-9832-c4065945c130"				},				"source": {					"extension": [						{							"url": "https://reportstream.cdc.gov/fhir/StructureDefinition/software-binary-id",							"valueString": "d5de310"						},						{							"url": "https://reportstream.cdc.gov/fhir/StructureDefinition/software-install-date",							"valueInstant": "2024-06-05T15:42:52Z"						},						{							"url": "https://reportstream.cdc.gov/fhir/StructureDefinition/software-vendor-org",							"valueReference": {								"reference": "Organization/07640c5d-87cd-488b-9343-a226c5166539"							}						}					],					"software": "PRIME SimpleReport",					"version": "d5de310",					"endpoint": "https://simplereport.gov"				},				"focus": [					{						"reference": "Provenance/d0dd19cd-76a0-4e16-ab1d-dc5838247b61"					},					{						"reference": "DiagnosticReport/0bab3f94-feb4-4915-939d-1adc5da201f3"					}				]			}		},		{			"fullUrl": "Provenance/d0dd19cd-76a0-4e16-ab1d-dc5838247b61",			"resource": {				"resourceType": "Provenance",				"id": "d0dd19cd-76a0-4e16-ab1d-dc5838247b61",				"recorded": "2024-06-05T18:55:01.277Z",				"activity": {					"coding": [						{							"system": "http://terminology.hl7.org/CodeSystem/v2-0003",							"code": "R01",							"display": "ORU/ACK - Unsolicited transmission of an observation message"						}					]				},				"agent": [					{						"who": {							"reference": "Organization/719ec8ad-cf59-405a-9832-c4065945c130"						}					}				]			}		},		{			"fullUrl": "DiagnosticReport/0bab3f94-feb4-4915-939d-1adc5da201f3",			"resource": {				"resourceType": "DiagnosticReport",				"id": "0bab3f94-feb4-4915-939d-1adc5da201f3",				"identifier": [					{						"value": "0bab3f94-feb4-4915-939d-1adc5da201f3"					}				],				"basedOn": [					{						"reference": "ServiceRequest/185170f3-4361-48ff-85e1-808a66624470"					}				],				"status": "final",				"code": {					"coding": [						{							"system": "http://loinc.org",							"code": "94531-1"						}					]				},				"subject": {					"reference": "Patient/7c0d1de9-270e-4d9c-a4ec-af92560cec67"				},				"effectiveDateTime": "2024-06-05T18:39:58+00:00",				"issued": "2024-06-05T18:55:01+00:00",				"specimen": [					{						"reference": "Specimen/dc7af370-fc07-4b00-abc7-9b5dd87cf4d2"					}				],				"result": [					{						"reference": "Observation/5ab37a34-59f5-421f-92bd-baffaf26bb72"					}				]			}		},		{			"fullUrl": "Patient/7c0d1de9-270e-4d9c-a4ec-af92560cec67",			"resource": {				"resourceType": "Patient",				"id": "7c0d1de9-270e-4d9c-a4ec-af92560cec67",				"extension": [					{						"url": "http://ibm.com/fhir/cdm/StructureDefinition/local-race-cd",						"valueCodeableConcept": {							"coding": [								{									"system": "http://terminology.hl7.org/CodeSystem/v3-Race",									"code": "2028-9"								}							],							"text": "asian"						}					},					{						"url": "https://reportstream.cdc.gov/fhir/StructureDefinition/ethnic-group",						"valueCodeableConcept": {							"coding": [								{									"system": "http://terminology.hl7.org/CodeSystem/v2-0189",									"code": "N",									"display": "Not Hispanic or Latino"								}							],							"text": "Not Hispanic or Latino"						}					}				],				"identifier": [					{						"value": "7c0d1de9-270e-4d9c-a4ec-af92560cec67"					}				],				"name": [					{						"family": "Granger",						"given": [							"Hermione"						]					}				],				"telecom": [					{						"system": "phone",						"value": "(212) 555 1234",						"use": "mobile"					}				],				"gender": "female",				"birthDate": "1990-07-21",								"address": [					{						"line": [							"8739 Gottlieb Terrace"						],						"city": "Majuro",						"state": "MH",						"postalCode": "96960"					}				],				"managingOrganization": {					"reference": "Organization/719ec8ad-cf59-405a-9832-c4065945c130"				}			}		},		{			"fullUrl": "Organization/719ec8ad-cf59-405a-9832-c4065945c130",			"resource": {				"resourceType": "Organization",				"id": "719ec8ad-cf59-405a-9832-c4065945c130",				"identifier": [					{						"use": "official",						"type": {							"coding": [								{									"system": "http://terminology.hl7.org/CodeSystem/v2-0301",									"code": "CLIA"								}							]						},						"value": "12D4567890"					}				],				"name": "Testing Lab",				"telecom": [					{						"system": "phone",						"value": "(530) 867 5309",						"use": "work"					}				],				"address": [					{						"line": [							"123 Beach Way"						],						"city": "Denver",						"state": "OK",						"postalCode": "80210",						"country": "USA"					}				]			}		},		{			"fullUrl": "Practitioner/ee29ccf5-631d-4b35-a6d4-30a61c0eb8d9",			"resource": {				"resourceType": "Practitioner",				"id": "ee29ccf5-631d-4b35-a6d4-30a61c0eb8d9",				"identifier": [					{						"system": "http://hl7.org/fhir/sid/us-npi",						"value": "1245319599"					}				],				"name": [					{						"family": "McTester",						"given": [							"Phil"						]					}				],				"telecom": [					{						"system": "phone",						"value": "(530) 867 5309",						"use": "work"					}				],				"address": [					{						"line": [							"321 Ocean Drive"						],						"city": "Denver",						"state": "OK",						"postalCode": "80210",						"country": "USA"					}				]			}		},		{			"fullUrl": "Specimen/dc7af370-fc07-4b00-abc7-9b5dd87cf4d2",			"resource": {				"resourceType": "Specimen",				"id": "dc7af370-fc07-4b00-abc7-9b5dd87cf4d2",				"identifier": [					{						"value": "80ed36a0-4bd1-42c3-bb56-81ea4ac1e75a"					}				],				"type": {					"coding": [						{							"system": "http://snomed.info/sct",							"code": "258500001"						}					],					"text": "Nasopharyngeal swab"				},				"subject": {					"reference": "Patient/7c0d1de9-270e-4d9c-a4ec-af92560cec67"				},				"receivedTime": "2024-06-05T18:39:58+00:00",				"collection": {					"collectedDateTime": "2024-06-05T18:39:58+00:00",					"bodySite": {						"coding": [							{								"system": "http://snomed.info/sct",								"code": "87100004"							}						],						"text": "Topography unknown (body structure)"					}				}			}		},		{			"fullUrl": "ServiceRequest/185170f3-4361-48ff-85e1-808a66624470",			"resource": {				"resourceType": "ServiceRequest",				"id": "185170f3-4361-48ff-85e1-808a66624470",				"extension": [					{						"url": "https://reportstream.cdc.gov/fhir/StructureDefinition/order-control",						"valueCodeableConcept": {							"coding": [								{									"system": "http://terminology.hl7.org/CodeSystem/v2-0119",									"code": "RE"								}							]						}					},					{						"url": "https://reportstream.cdc.gov/fhir/StructureDefinition/order-effective-date",						"valueDateTime": "2024-06-05T18:54:58+00:00"					}				],				"status": "completed",				"intent": "order",				"code": {					"coding": [						{							"system": "http://loinc.org",							"code": "94531-1"						}					]				},				"subject": {					"reference": "Patient/7c0d1de9-270e-4d9c-a4ec-af92560cec67"				},				"requester": {					"reference": "PractitionerRole/57a1a000-16e5-461a-930a-2e4779944bc2"				},				"performer": [					{						"reference": "Organization/719ec8ad-cf59-405a-9832-c4065945c130"					}				],				"supportingInfo": [					{						"reference": "Observation/dd5369b2-91e7-32d9-8c7f-884cad6b0391"					},					{						"reference": "Observation/fdf748f4-b187-31c6-b08d-334afc1c6a49"					},					{						"reference": "Observation/4c669397-3b8b-3448-a7c8-d2fb8c5afde5"					},					{						"reference": "Observation/4456d162-bfd8-37f3-aafe-1e6444c53934"					},					{						"reference": "Observation/0042a1cb-8473-3181-9b65-fcb08dc112a3"					}				]			}		},		{			"fullUrl": "Device/d303372c-70cb-46b7-bf74-23f4dc91e661",			"resource": {				"resourceType": "Device",				"id": "d303372c-70cb-46b7-bf74-23f4dc91e661",				"identifier": [					{						"type": {							"coding": [								{									"code": "MNI"								}							]						}					}				],				"manufacturer": "Access Bio, Inc.",				"deviceName": [					{						"name": "CareStart COVID-19 MDx RT-PCR",						"type": "model-name"					}				]			}		},		{			"fullUrl": "PractitionerRole/57a1a000-16e5-461a-930a-2e4779944bc2",			"resource": {				"resourceType": "PractitionerRole",				"id": "57a1a000-16e5-461a-930a-2e4779944bc2",				"practitioner": {					"reference": "Practitioner/ee29ccf5-631d-4b35-a6d4-30a61c0eb8d9"				},				"organization": {					"reference": "Organization/719ec8ad-cf59-405a-9832-c4065945c130"				}			}		},		{			"fullUrl": "Organization/07640c5d-87cd-488b-9343-a226c5166539",			"resource": {				"resourceType": "Organization",				"id": "07640c5d-87cd-488b-9343-a226c5166539",				"name": "SimpleReport"			}		},		{			"fullUrl": "Observation/5ab37a34-59f5-421f-92bd-baffaf26bb72",			"resource": {				"resourceType": "Observation",				"id": "5ab37a34-59f5-421f-92bd-baffaf26bb72",				"status": "final",				"code": {					"coding": [						{							"system": "http://loinc.org",							"code": "94500-6"						}					],					"text": "COVID-19"				},				"subject": {					"reference": "Patient/7c0d1de9-270e-4d9c-a4ec-af92560cec67"				},				"issued": "2024-06-05T18:54:58.594Z",				"performer": [					{						"reference": "Organization/719ec8ad-cf59-405a-9832-c4065945c130"					}				],				"valueCodeableConcept": {					"coding": [						{							"system": "http://snomed.info/sct",							"code": "260373001",							"display": "Detected"						}					]				},				"interpretation": [					{						"coding": [							{								"system": "http://terminology.hl7.org/CodeSystem/v2-0078",								"code": "A",								"display": "Abnormal"							}						]					}				],				"method": {					"extension": [						{							"url": "https://reportstream.cdc.gov/fhir/StructureDefinition/testkit-name-id",							"valueCoding": {								"code": "CareStart COVID-19 MDx RT-PCR_Access Bio, Inc."							}						}					],					"coding": [						{							"display": "CareStart COVID-19 MDx RT-PCR"						}					]				},				"specimen": {					"reference": "Specimen/dc7af370-fc07-4b00-abc7-9b5dd87cf4d2"				},				"device": {					"reference": "Device/d303372c-70cb-46b7-bf74-23f4dc91e661"				}			}		},		{			"fullUrl": "Observation/dd5369b2-91e7-32d9-8c7f-884cad6b0391",			"resource": {				"resourceType": "Observation",				"id": "dd5369b2-91e7-32d9-8c7f-884cad6b0391",				"identifier": [					{						"use": "official",						"type": {							"coding": [								{									"system": "http://loinc.org",									"code": "81959-9",									"display": "Public health laboratory ask at order entry panel"								}							]						}					}				],				"status": "final",				"code": {					"coding": [						{							"system": "http://loinc.org",							"code": "95419-8",							"display": "Has symptoms related to condition of interest"						}					],					"text": "Has symptoms related to condition of interest"				},				"subject": {					"reference": "Patient/7c0d1de9-270e-4d9c-a4ec-af92560cec67"				},				"valueCodeableConcept": {					"coding": [						{							"system": "http://terminology.hl7.org/ValueSet/v2-0136",							"code": "Y",							"display": "Yes"						}					]				}			}		},		{			"fullUrl": "Observation/fdf748f4-b187-31c6-b08d-334afc1c6a49",			"resource": {				"resourceType": "Observation",				"id": "fdf748f4-b187-31c6-b08d-334afc1c6a49",				"identifier": [					{						"use": "official",						"type": {							"coding": [								{									"system": "http://loinc.org",									"code": "81959-9",									"display": "Public health laboratory ask at order entry panel"								}							]						}					}				],				"status": "final",				"code": {					"coding": [						{							"system": "http://loinc.org",							"code": "11368-8",							"display": "Illness or injury onset date and time"						}					],					"text": "Illness or injury onset date and time"				},				"subject": {					"reference": "Patient/7c0d1de9-270e-4d9c-a4ec-af92560cec67"				},				"valueDateTime": "2024-06-01"			}		},		{			"fullUrl": "Observation/4c669397-3b8b-3448-a7c8-d2fb8c5afde5",			"resource": {				"resourceType": "Observation",				"id": "4c669397-3b8b-3448-a7c8-d2fb8c5afde5",				"identifier": [					{						"use": "official",						"type": {							"coding": [								{									"system": "http://loinc.org",									"code": "81959-9",									"display": "Public health laboratory ask at order entry panel"								}							]						}					}				],				"status": "final",				"code": {					"coding": [						{							"system": "http://loinc.org",							"code": "82810-3",							"display": "Pregnancy status"						}					],					"text": "Pregnancy status"				},				"subject": {					"reference": "Patient/7c0d1de9-270e-4d9c-a4ec-af92560cec67"				},				"valueCodeableConcept": {					"coding": [						{							"system": "http://snomed.info/sct",							"code": "60001007",							"display": "Not pregnant"						}					]				}			}		},		{			"fullUrl": "Observation/4456d162-bfd8-37f3-aafe-1e6444c53934",			"resource": {				"resourceType": "Observation",				"id": "4456d162-bfd8-37f3-aafe-1e6444c53934",				"identifier": [					{						"use": "official",						"type": {							"coding": [								{									"system": "http://loinc.org",									"code": "81959-9",									"display": "Public health laboratory ask at order entry panel"								}							]						}					}				],				"status": "final",				"code": {					"coding": [						{							"system": "http://loinc.org",							"code": "95418-0",							"display": "Employed in a healthcare setting"						}					],					"text": "Employed in a healthcare setting"				},				"subject": {					"reference": "Patient/7c0d1de9-270e-4d9c-a4ec-af92560cec67"				},				"valueCodeableConcept": {					"coding": [						{							"system": "http://terminology.hl7.org/ValueSet/v2-0136",							"code": "Y",							"display": "Yes"						}					]				}			}		},		{			"fullUrl": "Observation/0042a1cb-8473-3181-9b65-fcb08dc112a3",			"resource": {				"resourceType": "Observation",				"id": "0042a1cb-8473-3181-9b65-fcb08dc112a3",				"identifier": [					{						"use": "official",						"type": {							"coding": [								{									"system": "http://loinc.org",									"code": "81959-9",									"display": "Public health laboratory ask at order entry panel"								}							]						}					}				],				"status": "final",				"code": {					"coding": [						{							"system": "http://loinc.org",							"code": "95421-4",							"display": "Resides in a congregate care setting"						}					],					"text": "Resides in a congregate care setting"				},				"subject": {					"reference": "Patient/7c0d1de9-270e-4d9c-a4ec-af92560cec67"				},				"valueCodeableConcept": {					"coding": [						{							"system": "http://terminology.hl7.org/ValueSet/v2-0136",							"code": "Y",							"display": "Yes"						}					]				}			}		}	]}