Releases: RVanDamme/MUFFIN
Releases · RVanDamme/MUFFIN
fix nextflow incompatibility
fix nextflow incompatibility
fixed not working spades conda config
fixed maxbin not getting the cores info
also added run reports to the result dir for workflow performance
fixed muffin not working on current nextflow
- fixed an issue that recent nextflow was not working for muffin, fixes #25
MUFFIN 1.0.3 Using nextflow 20.07+
MUFFIN 1.0.3 Using nextflow 20.07+
update:
Updated sourmash and the gtdb database formated for sourmash7
Updated CheckM
Updated Metawrap
Fix:
Cpu/ram requirement
classify step parser
fix checkm issue (EOF error)
Norefine option
Maxbin issue #14
Concoct
Various issue from #15
MUFFIN V1.0.2 with Nextflow 20.07+
MUFFIN 1.0.2 Using nextflow 20.07+
update:
- syntax of DSL2 in the whole pipeline
- version of Flye to 2.8 (sourmash genome size not required anymore)
- version of metawrap to 2.3
- increased error strategy to 5 retry
Fix:
- metawrap installation through conda
- version control of nextflow
MUFFIN V1.0.1 with Nextflow 20+ but >20.7.1
MUFFIN 1.0.1
update:
- Conda version of Concoct and Samtools
Fix:
- Fix checkm setup of DB
MUFFIN V1.0.0 with Nextflow 20+ but >20.7.1
MUFFIN 1.0.0
Addition:
-The whole MUFFIN pipeline including
- 2 different methods to analyze
- multiple engine and executor available
- a modular and flexible analysis
- a nice and tidy parser for annotation
update:
-Works with nextflow version 20+
Legacy 0.1 compatible nextflow 19.X
The legacy 0.1 version is the first version of nextflow that can be run (all the steps in a row, no modular choice yet)
It can be run on 19.X version of nextflow
legacy_beta.0.2
fix pankegg all gene link + text color