Update path to gProfiler.sh

Workflomics · Oct 16, 2024 · 45d86bc · 45d86bc
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diff --git a/README.md b/README.md
@@ -17,4 +17,4 @@ When using Workflomics web interface, workflows are referencing this repository
 
 ## Testing
 
-To test the CWL annotations, run `test_cwl_annotations.cwl` in the repository root. This script runs the test scripts in the 'test' directory of each tool, testing whether the CWL annotations pass as stand-alone workflow steps. This requires `cwltool` and `docker` to be installed.
+To test the CWL annotations, run `test_cwl_annotations.sh` in the repository root. This script runs the test scripts in the 'test' directory of each tool, testing whether the CWL annotations pass as stand-alone workflow steps. This requires `cwltool` and `docker` to be installed.
diff --git a/cwl-tools/gprofiler/gprofiler.cwl b/cwl-tools/gprofiler/gprofiler.cwl
@@ -16,7 +16,7 @@ inputs:
       position: 1
     default:
       class: File
-      location: https://raw.githubusercontent.com/Workflomics/tools-and-domains/main/cwl-tools/gprofiler/gprofiler.sh
+      location: https://raw.githubusercontent.com/Workflomics/tools-and-domains/main/cwl-tools/gprofiler/gProfiler.sh
   gProfiler_in_1:
     type: File
     doc: "Input file containing gene/query data"
Original file line number	Diff line number	Diff line change
Expand Up		@@ -17,4 +17,4 @@ When using Workflomics web interface, workflows are referencing this repository

		## Testing

		To test the CWL annotations, run `test_cwl_annotations.cwl` in the repository root. This script runs the test scripts in the 'test' directory of each tool, testing whether the CWL annotations pass as stand-alone workflow steps. This requires `cwltool` and `docker` to be installed.
		To test the CWL annotations, run `test_cwl_annotations.sh` in the repository root. This script runs the test scripts in the 'test' directory of each tool, testing whether the CWL annotations pass as stand-alone workflow steps. This requires `cwltool` and `docker` to be installed.