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Update CWL paths #67

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Update CWL paths #67

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vedran-kasalica
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This pull request updates the cwlVersion in several CWL tool files from v1.0 to v1.2 and modifies a configuration file to update a URL path to the correct one.

The changes ensure that the CWL version used aligns with our guidelines and that the template domain is well annotated.

@vedran-kasalica vedran-kasalica marked this pull request as draft September 30, 2024 09:41
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