test: Add -nc to wget

bioinformaticsorphanage · Jul 5, 2024 · bbd443f · bbd443f
1 parent ed37357
commit bbd443f
Showing 1 changed file with 3 additions and 3 deletions.
diff --git a/justfile b/justfile
@@ -1,6 +1,6 @@
 dragen  := "./result/bin/dragen-os"
 
-test_segfault: # test_data build_reference
+test_segfault: test_data build_reference
     {{dragen}} -r dragmap --RGSM test --num-threads 2 -1 SRX882903_T2.fastq.gz > output.log
 
 build_reference: test_data
@@ -12,8 +12,8 @@ build_reference: test_data
         --ht-num-threads 2
 
 test_data:
-    wget https://raw.githubusercontent.com/nf-core/test-datasets/nascent/testdata/SRX882903_T2.fastq.gz
-    wget https://raw.githubusercontent.com/nf-core/test-datasets/nascent/reference/GRCh38_chr21.fa
+    wget -nc https://raw.githubusercontent.com/nf-core/test-datasets/nascent/testdata/SRX882903_T2.fastq.gz
+    wget -nc https://raw.githubusercontent.com/nf-core/test-datasets/nascent/reference/GRCh38_chr21.fa
 
 issue_10:
     {{dragen}} \