Skip to content

Issues: dib-lab/dammit

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

67 Open 98 Closed
67 Open 98 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

unable to install databases
#243 opened May 19, 2023 by peter0k
3
dammit install through conda --- stuck at Solving environment
#242 opened Jan 30, 2023 by Liyong-Zhang
problem in downloading database when running dammit databases --install
#241 opened Nov 27, 2022 by tboonf
TaskLoader issue
#239 opened Sep 28, 2022 by jarcasariego
4
doit.cmd_base.py:TaskLoader
#238 opened Jun 15, 2022 by Snettisham
databases installation errors
#237 opened May 11, 2022 by ncnlll
Not recognizing BUSCO?
#236 opened Feb 2, 2022 by incoreygible
Download issue
#233 opened Oct 12, 2021 by mthang
4 tasks
No symbol dbm_open found in library libdb-6.2.so
#230 opened May 13, 2021 by pmoulos
1
curl: (28) Failed to connect to cegg.unige.ch port 21: Connection timed out
#229 opened May 9, 2021 by hoelzer
14
TypeError: an integer is required (got type bytes)
#227 opened Apr 1, 2021 by jtoy7
2
Solving environment: failed with repodata
#225 opened Mar 5, 2021 by PedroDaPos
1
TODO: Move target generation inside Snakefile
#218 opened Jan 29, 2021 by camillescott 2.0
TypeError: lastal_task() got an unexpected keyword argument 'pbs'
#203 opened Dec 15, 2020 by AntonioBaeza
6
Can I install newer versions of BUSCO than v2?
#202 opened Nov 30, 2020 by sformel
Please delete this issue
#195 opened Aug 17, 2020 by vragh
TaskError - taskid:hmmscan:longest_orfs.pep.x.Pfam-A.hmm
#194 opened Aug 14, 2020 by sarah872
Get metalink working for database download
#192 opened Aug 1, 2020 by bluegenes
@camillescott
seqid inconsistency with --no-rename between shmlast and other programs bug
#190 opened Jul 10, 2020 by camillescott 2.0
damit annotate Exited with exit code 140
#187 opened Jun 7, 2020 by CeciliaDeng
2
Error: sqlite3 unable to open database file
#183 opened May 15, 2020 by blasks
4
try using a snakemake profile to set cluster run params
#182 opened May 11, 2020 by bluegenes
Accidentally ran without pep file at first. Which files to delete? And nohup issue
#163 opened Mar 29, 2020 by christa88
BUSCO v2 database download fails, but gets marked as done
#161 opened Mar 4, 2020 by eburgueno
lastdb:uniref90
#154 opened Sep 30, 2019 by AEG4
1
ProTip! What’s not been updated in a month: updated:<2024-10-23.