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PlatyMatch ROI table sorting fix #111

Merged
merged 2 commits into from
Jul 10, 2024
Merged

PlatyMatch ROI table sorting fix #111

merged 2 commits into from
Jul 10, 2024

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nrepina
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@nrepina nrepina commented Jul 10, 2024

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…less.

Also improve info messages to include round info.
…ta tables.

Previously assumed that order of ROI table follows numerically increasing order. However this might not be the case after organoid-level registration, as after relabeling there is no convenient anndata function to sort X based on obs names. Therefore modify PlatyMatch task to load ROIs based on organoid label, not row id. Note that organoid transformation matrices now saved based on label value, not row id.
@nrepina nrepina merged commit c6759ca into main Jul 10, 2024
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