Skip to content

fetchNOMe: fast retrieval of NOMe-seq data from BAM files

Latest
Compare
Choose a tag to compare
@EvgOz EvgOz released this 03 Oct 11:17
· 15 commits to main since this release

DOI

This R package provides functionality for fast retrieval of NOMe-seq data (M.CviPI-induced GpC methylation as well as endogenous CpG methylation) from BAM files generated by pipelines for alignment of bisulfite converted cytosine methylation data. This release has been tested on BAM files generated by QuasR, Bismark and BISCUIT aligners for bisulfite converted methylation data.