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Add new slots and enums to Study; add new class Dataset #163

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merged 17 commits into from
Mar 25, 2024
Merged

Add new slots and enums to Study; add new class Dataset #163

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66b1a7c
added Study slots (no enums or Dataset slots yet)
lopierra Mar 2, 2024
0bedd6d
slot updates after Modeling meeting
lopierra Mar 6, 2024
b7e0585
updated Study slots; added Study enums; added enum_dataCategory to Assay
lopierra Mar 6, 2024
d917a4f
added dataset slots
lopierra Mar 8, 2024
dadc6b5
study & dataset updates
lopierra Mar 15, 2024
711b20f
changes
lopierra Mar 15, 2024
29f385b
.
lopierra Mar 15, 2024
6737334
.
lopierra Mar 15, 2024
c6a644f
.
lopierra Mar 15, 2024
61d0134
more changes after meeting with madan
lopierra Mar 15, 2024
9fe6dca
more changes after meeting with madan
lopierra Mar 15, 2024
4a8ddcd
.
lopierra Mar 18, 2024
53a8705
.
lopierra Mar 18, 2024
1bbb40e
dbgap
lopierra Mar 20, 2024
24b4bfc
add Other to program enum
lopierra Mar 20, 2024
9b6a97c
updated descriptions & enums
lopierra Mar 20, 2024
db71350
mesh prefix
madanucd Mar 22, 2024
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2 changes: 1 addition & 1 deletion src/linkml/include_assay.yaml
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Original file line number Diff line number Diff line change
Expand Up @@ -254,7 +254,7 @@ slots:
Metabolomics, Immune profiling, Transcriptomics)
title: Data Category
required: true
range: string
range: enum_DataCategory
dataType:
definition_uri: include:dataType
description: Specific type of data contained in file (e.g. Preprocessed metabolite relative abundance, Absolute protein concentration, Aligned reads, Simple nucleotide variations, GVCF, Gene expression quantifications, Gene fusions, Somatic copy number variations, Somatic structural variations)
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