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phylogenetic: Add config option ancestral_root_seq #297

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merged 1 commit into from
Dec 5, 2024

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joverlee521
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@joverlee521 joverlee521 commented Nov 26, 2024

Description of proposed changes

Allow users to define an optional --root-sequence for augur ancestral.

This commit only adds the new config option to the CI config. It is not used in the default Nextstrain builds because it's not clear whether it's needed.

Related issue(s)

#296

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Allow users to define an optional `--root-sequence` for
`augur ancestral`.

This commit only adds the new config option to the CI config.
It is not used in the default Nextstrain builds because it's not clear
whether it's needed.
@joverlee521
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Uploaded CI build to staging and used as an ad-hoc Nextclade dataset

Screenshot 2024-11-26 at 2 43 29 PM

@joverlee521 joverlee521 merged commit 02f660a into master Dec 5, 2024
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@joverlee521 joverlee521 deleted the phylo-ancestral-root branch December 5, 2024 18:02
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4 participants