Merge pull request #208 from nf-core/de_resources

Fix resource issues and bump versions
nf-core · Nov 27, 2023 · f09a2fc · f09a2fc
2 parents 47ef421 + 804d6e5
commit f09a2fc
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diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -3,6 +3,16 @@
 The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/)
 and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
 
+## v1.5.0dev
+
+### `Added`
+
+### `Fixed`
+
+- [[#208](https://github.com/nf-core/differentialabundance/pull/208)] - Fix resource issues and bump versions ([@pinin4fjords](https://github.com/pinin4fjords), review by [@sguizard](https://github.com/sguizard))
+
+### `Changed`
+
 ## v1.4.0 - 2023-11-27
 
 ### `Added`

diff --git a/assets/multiqc_config.yml b/assets/multiqc_config.yml
@@ -1,7 +1,7 @@
 report_comment: >
-  This report has been generated by the <a href="https://github.com/nf-core/differentialabundance/releases/tag/1.4.0" target="_blank">nf-core/differentialabundance</a>
+  This report has been generated by the <a href="https://github.com/nf-core/differentialabundance/releases/tag/dev" target="_blank">nf-core/differentialabundance</a>
   analysis pipeline. For information about how to interpret these results, please see the
-  <a href="https://nf-co.re/differentialabundance/1.4.0/docs/output" target="_blank">documentation</a>.
+  <a href="https://nf-co.re/differentialabundance/dev/docs/output" target="_blank">documentation</a>.
 report_section_order:
   "nf-core-differentialabundance-methods-description":
     order: -1000

diff --git a/conf/base.config b/conf/base.config
@@ -36,7 +36,7 @@ process {
     }
     withLabel:process_medium {
         cpus   = { check_max( 6     * task.attempt, 'cpus'    ) }
-        memory = { check_max( 2.GB * task.attempt, 'memory'  ) }
+        memory = { check_max( 36.GB * task.attempt, 'memory'  ) }
         time   = { check_max( 8.h   * task.attempt, 'time'    ) }
     }
     withLabel:process_high {

diff --git a/modules.json b/modules.json
@@ -37,7 +37,7 @@
                     },
                     "deseq2/differential": {
                         "branch": "master",
-                        "git_sha": "c992bd93b22a97feda5f04755511366c45423626",
+                        "git_sha": "9326d73af3fbe2ee90d9ce0a737461a727c5118e",
                         "installed_by": ["modules"]
                     },
                     "geoquery/getgeo": {
@@ -57,7 +57,7 @@
                     },
                     "limma/differential": {
                         "branch": "master",
-                        "git_sha": "25047aa940979f64b31d19b94c483a9254263892",
+                        "git_sha": "9326d73af3fbe2ee90d9ce0a737461a727c5118e",
                         "installed_by": ["modules"]
                     },
                     "proteus/readproteingroups": {

diff --git a/modules/nf-core/deseq2/differential/main.nf b/modules/nf-core/deseq2/differential/main.nf
diff --git a/modules/nf-core/limma/differential/main.nf b/modules/nf-core/limma/differential/main.nf
diff --git a/nextflow.config b/nextflow.config
@@ -386,7 +386,7 @@ manifest {
     description     = 'Differential abundance analysis'
     mainScript      = 'main.nf'
     nextflowVersion = '!>=23.10.0'
-    version         = '1.4.0'
+    version         = '1.5.0dev'
     doi             = '10.5281/zenodo.7568000'
 }