Repositories list

• tree-reconciliation

  Public
  Reconciling gene and species tree for all COG categories

  Jupyter Notebook

  •0•1•0•0•Updated Dec 20, 2024Dec 20, 2024

• phosphorus-limitation

  Public
  R

  •

  MIT License

  •0•1•0•0•Updated Nov 21, 2024Nov 21, 2024

• spacehogs-tutorials

  Public
  Help tutorials for server things!

  Python

  •1•0•0•0•Updated Aug 6, 2024Aug 6, 2024

• sulfur

  Public
  A repository for scripts used in the analysis for the manuscript entitled "The evolution and spread of sulfur-cycling enzymes reflect volcanic sulfur sources and the redox state of the early Earth"

  Python

  •0•1•1•0•Updated Feb 16, 2024Feb 16, 2024

• transposase-deep-ocean

  Public
  R

  •

  MIT License

  •0•2•0•0•Updated Jan 9, 2024Jan 9, 2024

• bioinformatics-carleton

  Public
  Lab protocals for Carleton College Bioinformatics, rendered with Sphinx.

  documentationbioinformaticsbiology+ 2sphinxcarleton

  Python

  •1•2•0•0•Updated Sep 22, 2023Sep 22, 2023

• pangenome-selection

  Public template
  A repository as a Supplementary Methods of Moulana et al., 2019

  evolutionmetagenomic-analysispangenome+ 1pangenome-clustering

  Python

  •1•0•0•0•Updated Apr 22, 2023Apr 22, 2023

• functional_metagenomics

  Public
  Python

  •0•0•0•0•Updated Jul 12, 2019Jul 12, 2019

• pangenome_evolution

  Public
  0•0•0•0•Updated Jul 10, 2019Jul 10, 2019

• SAGs

  Public
  bioinformaticsbiological-data-analysis

  Python

  •0•1•0•0•Updated Jun 8, 2018Jun 8, 2018