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Significant refactor to include geographical boundaries #565

Merged
merged 99 commits into from
Sep 9, 2023
Merged

Significant refactor to include geographical boundaries #565

merged 99 commits into from
Sep 9, 2023

Commits on Aug 29, 2023

  1. improves docstrings org view indiv kpi 

    Signed-off-by: anchit-chandran <[email protected]>
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  2. hoverlabel updates 

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  3. rms lots of prev agg code 

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  4. rm unused imports report queries 

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  5. restructure org view file 

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  6. refactors updating all data chart html out of view into fn 

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  7. actually returns all_data obj from update chart html fn 

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Commits on Aug 30, 2023

  1. adds download full e12 user list button with test 

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  2. initial struct for cohort calc test 

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  3. merges duplicate community paeds + hospitals in rcpch_organisations 

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  4. don't calc avg line if no data (avoid zero division error) 

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  5. make national kpi pie clickable_card 

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  6. change distribution by ethnicity to rcpch_light_blue card 

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  7. updates cohort num calcs 

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Commits on Aug 31, 2023

  1. rm cohort txt 

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  2. clean cohort num file 

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  3. rm print statement score kpi 8 

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  4. change seed to known 5 orgs 

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  5. clean test get filtered cases 

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  6. clean test update kpiagg 

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  7. adds orgs to seed 

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  8. adds update all agg models view + button 

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  9. further implements aggregate button front-end 

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  10. rm validation comment in case model 

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Commits on Sep 1, 2023

  1. handles welsh + icb aggs, adds helper destroy+reseed agg funtions 

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  2. make bar charts integer passed pct instead of float 

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  3. restyle cohort stats 

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  4. group order bar charts by none, then numericla 

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  5. fix type hint 

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  6. allows abstractions to be specified aggregate_by 

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  7. updates tasks.py with aggregate update fn 

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Commits on Sep 3, 2023

  1. add trust model, merge boundary / regions 

    - clean seeding lists
- add london boroughs
- remove unused constants
- rebuild migrations for seeding and refactor model names
- refactor admin
- remove unused boundary files
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  2. refactor report queries to new models

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  3. refactor organisation view and aggregations no LHB

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  4. refactor templates with parents 

    refactor kpi/aggregations
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Commits on Sep 4, 2023

  1. update mastehad bg 

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  2. update e12 logo 

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  3. replace e12 masthead logo 

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  4. udpates footer text 

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  5. updates e12 index card 

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  6. refactor model names and fields 

    - boundary names and codes added
- entity models renamed and pruned of unused fields
- seeding refactored
Errors with refactoring:
- Comorbidity
- ComorbidityList
- Syndrome
- SyndromeList
-EpilepsyCause
may have some inconsistencies

Co-authored-by: Anchit <[email protected]>
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  7. fix enums

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  8. adds final field value to enumabstractionlevel.country+national 

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  9. remove is_rcpch_audit_team_member button access

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  10. update old field name 

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  11. update old field name syndrome 

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  12. update test vvalue counts with new abstraction levels 

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  13. Merge remote-tracking branch 'origin/health-boards' into health-boards

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  14. fixes to test perm view comorbidities 

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  15. fix comorb test perms delete 

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  16. fix test perm create comorb 

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  17. fix epilepsy cause + comorb test_perms_update 

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  18. add decorator 

    - fixes high vulnerability user  can edit own record
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  19. add london borough tiles 

    fix lhb vs trusts in template
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  20. nhs england region shape selected region

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  21. add hsts headers and x-frame middleware support

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Commits on Sep 5, 2023

  1. fix create e12 user test - add e...12_user_id to view + url params 

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  2. fix test_user_create_diff_org_success 

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  3. fix test_user_creation_forbidden 

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  4. fix all tests related to using e..12_user_id and views + urls + templ… 

    …ates

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  5. adds epilepsy12_user_id args to view redirects 

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  6. updates download button e12 users list test + code 

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  7. fix test_update_actions to use Comorb+SyndromLists 

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  8. fix test_age_at_registration_cannot_be_gt_24yo - template name change 

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  9. fix test_total_fields_expected_multiaxial_diagnosis_syndrome_fields 

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  10. fix test_get_filtered_cases_queryset_for_returns_correct_count 

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  11. fix test calc kpi value counts 

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  12. updates doc strings get_filtered_cases_queryset_for 

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  13. update doc strings kpi value counts 

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  14. fix test update kpi agg model 

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  15. adds kpi agg seed migration 

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  16. rm country different logic in getting kpi agg data for view 

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  17. refactor trust.trust_name to trust.name 

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  18. fix kpi table for eng + welsh orgs 

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  19. fix maps for eng / welsh 

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  20. improves indiv kpi pies eng vs wales 

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Commits on Sep 6, 2023

  1. change trust_name to name in migrations 

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  2. ad local health board to welsh indv bar kpi chart 

    Signed-off-by: anchit-chandran <[email protected]>
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  3. make lhb pie card clickable 

    Signed-off-by: anchit-chandran <[email protected]>
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  4. redo pie containers indv kpis 

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  5. admin register local h board kpi agg model 

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  6. adds a get total cases used in agg for kpi agg models 

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  7. user types

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  8. users cannot delet themselves

    @eatyourpeas
    eatyourpeas committed Sep 6, 2023
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Commits on Sep 7, 2023

  1. no postcode fix

    @eatyourpeas
    eatyourpeas committed Sep 7, 2023
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  2. update transfer email to remove child 

    remove ability to edit lead site
    @eatyourpeas
    eatyourpeas committed Sep 7, 2023
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  3. add cohort to str reprs of kpiagg models 

    Signed-off-by: anchit-chandran <[email protected]>
    @anchit-chandran
    anchit-chandran committed Sep 7, 2023
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  4. make indv pie chart cards all same set height 

    Signed-off-by: anchit-chandran <[email protected]>
    @anchit-chandran
    anchit-chandran committed Sep 7, 2023
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  5. comment out DRF

    @eatyourpeas
    eatyourpeas committed Sep 7, 2023
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  6. kpi agg model method to calc total cases handle none 

    Signed-off-by: anchit-chandran <[email protected]>
    @anchit-chandran
    anchit-chandran committed Sep 7, 2023
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  7. adjust stylings for indv kpi pies when no data 

    Signed-off-by: anchit-chandran <[email protected]>
    @anchit-chandran
    anchit-chandran committed Sep 7, 2023
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  8. Merge branch 'health-boards' of https://github.com/rcpch/rcpch-audit-… 

    …engine into health-boards
    @anchit-chandran
    anchit-chandran committed Sep 7, 2023
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  9. make bar text darker for bar charts with None data 

    Signed-off-by: anchit-chandran <[email protected]>
    @anchit-chandran
    anchit-chandran committed Sep 7, 2023
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Commits on Sep 8, 2023

  1. change mental_health_issue to mental_health_issues 

    change from single choice to multiple choice
    @eatyourpeas
    eatyourpeas committed Sep 8, 2023
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Commits on Sep 9, 2023

  1. confirm delete modal for case 

    involves test refactor for permissions to accept htmx params
    @eatyourpeas
    eatyourpeas committed Sep 9, 2023
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  2. fix email resend 

    - only shows if emailConfirmed is false
- url fail fix
    @eatyourpeas
    eatyourpeas committed Sep 9, 2023
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  3. remove previous user creation forms 

    - fix user workflow
- hide resend email button if confirmed
    @eatyourpeas
    eatyourpeas committed Sep 9, 2023
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  4. stub out tests 

    remove commented out code
    @eatyourpeas
    eatyourpeas committed Sep 9, 2023
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  5. Merge branch 'development' into health-boards

    @eatyourpeas
    eatyourpeas authored Sep 9, 2023
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