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Patch 1.3.1 #128

Merged
merged 21 commits into from
Sep 25, 2024
Merged

Patch 1.3.1 #128

merged 21 commits into from
Sep 25, 2024

Commits on Sep 24, 2024

  1. patch 1.3.1

    @tkchafin
    tkchafin committed Sep 24, 2024
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  2. Merge pull request #127 from tkchafin/patch 

    patch 1.3.1
    @tkchafin
    tkchafin authored Sep 24, 2024
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  3. pass interleaved fastq after cram conversion

    @tkchafin
    tkchafin authored Sep 24, 2024
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  4. Update align_short.nf

    @tkchafin
    tkchafin authored Sep 24, 2024
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  5. Update CHANGELOG.md

    @tkchafin
    tkchafin authored Sep 24, 2024
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  6. Update nextflow.config

    @tkchafin
    tkchafin authored Sep 24, 2024
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  7. Update LICENSE

    @tkchafin
    tkchafin authored Sep 24, 2024
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  8. Update download_pipeline.yml

    @tkchafin
    tkchafin authored Sep 24, 2024
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  9. Update linting.yml

    @tkchafin
    tkchafin authored Sep 24, 2024
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  10. Update download_pipeline.yml

    @tkchafin
    tkchafin authored Sep 24, 2024
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  11. Delete .github/workflows/download_pipeline.yml

    @tkchafin
    tkchafin authored Sep 24, 2024
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  12. BBtools citation

    @tkchafin
    tkchafin authored Sep 24, 2024
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  13. Merge pull request #129 from sanger-tol/tkchafin-patch-1 

    BBtools citation
    @tkchafin
    tkchafin authored Sep 24, 2024
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Commits on Sep 25, 2024

  1. Update CHANGELOG.md 

    Co-authored-by: Matthieu Muffato <[email protected]>
    @tkchafin @muffato
    tkchafin and muffato authored Sep 25, 2024
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  2. Update conf/base.config 

    Co-authored-by: Matthieu Muffato <[email protected]>
    @tkchafin @muffato
    tkchafin and muffato authored Sep 25, 2024
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  3. Update CITATIONS.md

    @tkchafin
    tkchafin authored Sep 25, 2024
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  4. prettier linting

    @tkchafin
    tkchafin committed Sep 25, 2024
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  5. Merge pull request #131 from tkchafin/patch 

    prettier linting
    @tkchafin
    tkchafin authored Sep 25, 2024
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  6. Update CHANGELOG.md

    @tkchafin
    tkchafin authored Sep 25, 2024
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  7. prettier linting

    @tkchafin
    tkchafin committed Sep 25, 2024
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  8. Merge pull request #132 from tkchafin/patch 

    prettier linting
    @tkchafin
    tkchafin authored Sep 25, 2024
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