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18 Open 421 Closed
18 Open 421 Closed
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Issues list

Would seekable zstd speed up seqkit?
#496 opened Nov 22, 2024 by fdecarpentier
seqkit grep count instances of each sequence in id.txt separately
#495 opened Nov 22, 2024 by padpadpadpad
2 tasks done
3
add some function to extract cdna and/or protein sequences.
#494 opened Nov 18, 2024 by xiekunwhy
3
Filter sequences by dust score and entropy
#493 opened Nov 14, 2024 by fgvieira
4
seqkit rmdup killed
#491 opened Nov 1, 2024 by JieWu2012
2
Trim a multiple sequence alignment based on a BED
#477 opened Jul 5, 2024 by mbhall88
4
[feature request] seqkit subseq with --circular option?
#475 opened Jun 28, 2024 by xinehc
4
seqkit replace: conflict with -m flag
#474 opened Jun 28, 2024 by kabilov
2
Seqkit seq could filter by a %of nucleotides above a specific quality threshold (both user-defined)
#472 opened Jun 27, 2024 by MiguelHK
2
Parallel decompression of FASTQ files generated by seqkit enhancement
#443 opened Mar 9, 2024 by divonlan
5
[feature suggestion] Reverse translate protein search expression into nucleotide regex or degenerate base sequence
#418 opened Oct 4, 2023 by samuell
3 tasks done
2
Sampling sequences by number is not truly random
#386 opened May 16, 2023 by alvanuffelen
4 tasks done
3
Seqkit on MultiQC
#377 opened Mar 15, 2023 by fgvieira
1
[Feature suggestion][amplicon] primer-pair searching limit
#349 opened Nov 18, 2022 by Subject-13
4 tasks done
2
how can I get an interleaved fastq file from two pair-end seq files? new command
#226 opened Jul 7, 2021 by tinyfallen
4
seqkit amplicon only keeps one amplicon enhancement
#191 opened Feb 22, 2021 by mlosilla
5
subseq enhancement - fasta ID and comment for bed, gtf and gff enhancement
#177 opened Jan 22, 2021 by thackl
2
N50 and L50 jargon is confusing new feature
#15 opened Jun 8, 2017 by johnomics
9
ProTip! no:milestone will show everything without a milestone.