update vignette

waldronlab · Sep 22, 2023 · a397963 · a397963
1 parent 085cda7
commit a397963
Showing 1 changed file with 2 additions and 15 deletions.
diff --git a/vignettes/articles/phangorn.Rmd b/vignettes/articles/phangorn.Rmd
@@ -368,23 +368,10 @@ phyData
 ```
 
 ```{r}
-system.time({
-    fit <- pml(pruned_tree, phyData)
-    asr_output <- ancestral.pml(fit, 'ml')
-})
+fit <- pml(pruned_tree, phyData)
+asr_output <- ancestral.pml(fit, 'ml')
 ```
 
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 ```{r}
 system.time(
     fit <- fitMk.parallel(