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V2 group read file not found error #2480

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will-moore
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This aims to fix an issue I reported at #2412 (comment)
which is causing a lot of test failures when updating ome-zarr-py to use zarr v3 at ome/ome-zarr-py#404

TODO:

  • Add unit tests and/or doctests in docstrings
  • Add docstrings and API docs for any new/modified user-facing classes and functions
  • New/modified features documented in docs/tutorial.rst
  • Changes documented in docs/release.rst
  • GitHub Actions have all passed
  • Test coverage is 100% (Codecov passes)

@will-moore
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There are a lot of test failures above, but it looks like my test passed!

tests/test_v2.py .................                                       [100%]

@joshmoore
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This PR fixes about 100 failures in https://github.com/ome/ome-zarr-py/pull/404/files#diff-d51ad4cb28d657d5e09c58f40674b95273611983353ab5d7bb2049bbc6303f7b ; I've fixed the merge conflict and approved the workflows. 🤞🏽 that it goes green.

@joshmoore
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Looks like fixing the merge conflict led to:

FAILED tests/test_v2.py::test_simple_group - TypeError: LocalStore.__init__() got an unexpected keyword argument 'mode'

@will-moore
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Thanks @joshmoore. Updating my test, looks like it passes without the fix in this PR, so it seems to have been fixed elsewhere. Closing for now...

@will-moore will-moore closed this Nov 13, 2024
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2 participants