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363 Open 946 Closed
363 Open 946 Closed
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Issues list

in_manifest metamodelcore.py issues
#2274 opened Nov 25, 2024 by aclum
1
@aclum
5
Expand description of tiss_cult_growth_med slot
#2267 opened Nov 13, 2024 by pkalita-lbl
determine if and how invalid example files should be used to illustrate deprecation of classes
#2260 opened Nov 12, 2024 by turbomam
Find replacements for GENEPIO and OMIT mappings if possible and/or define prefixes
#2258 opened Nov 12, 2024 by turbomam
1
Move v11.1 deprecated elements to deprecation.yaml
#2257 opened Nov 12, 2024 by kheal
1
@kheal
1
Add slot and enumeration to MetaproteomicsAnalysis to enable separate types of workflows
#2256 opened Nov 12, 2024 by kheal
@kheal
1
Broken link: w3id link to MIxS terms is broken broken-link bug Something isn't working
#2255 opened Nov 12, 2024 by eecavanna
@turbomam
Docs: Mermaid diagram of development environment says "Unsupported markdown" in some places backlog Issue not assigned to a sprint or not completed during a sprint. Needs to be reprioritized. bug Something isn't working diagrams documentation Improvements or additions to documentation X SMALL Less than 8 hours, less than 1 day
#2247 opened Nov 3, 2024 by eecavanna
@eecavanna
Add inter-class diagram generated by refscan to schema documentation diagrams documentation Improvements or additions to documentation enhancement New feature or request gen-doc GH actions X SMALL Less than 8 hours, less than 1 day
#2242 opened Nov 1, 2024 by eecavanna
2 tasks done
1
@eecavanna
1
make slot usage range match structured syntax patterns
#2238 opened Oct 31, 2024 by aclum
@sierra-moxon @turbomam
4
Edit # headers in src/docs/v10-vs-v11-retrospective.md for better right hand index in GH Pages
#2233 opened Oct 30, 2024 by turbomam
@turbomam
Sentence in docs starts with lowercase letter and lacks trailing period bug Something isn't working documentation Improvements or additions to documentation X SMALL Less than 8 hours, less than 1 day
#2232 opened Oct 26, 2024 by eecavanna
2 tasks
@sujaypatil96
1
groom dependencies
#2217 opened Oct 16, 2024 by turbomam
@turbomam
5
do a poetry update?
#2216 opened Oct 16, 2024 by turbomam
@turbomam
Migrations: Revisit requirement of specifying schema versions in migrators
#2205 opened Oct 9, 2024 by eecavanna
GitHub Actions test_pages_build.yaml workflow fails on cross-fork PRs bug Something isn't working documentation Improvements or additions to documentation
#2199 opened Oct 8, 2024 by eecavanna
@sujaypatil96
2
GHA uses Python 3.9 for building docs, but Python 3.10 for building package cleanup dependencies Pull requests that update a dependency file devops GH actions X SMALL Less than 8 hours, less than 1 day
#2191 opened Sep 27, 2024 by eecavanna
2
post berkeley-schema-fy24 merge issue: review FileTypeEnum composition and correlation with other DataObject slots/relationships FileTypeEnum composition or usage of FileTypeEnum, which fills a DataObject's data_object_type slot
#2186 opened Sep 24, 2024 by turbomam
@turbomam
2
alternative to hard-coded ___indentation in environmental context value sets: is_a relations between permissible values
#2184 opened Sep 18, 2024 by turbomam
novaseq x updates
#2183 opened Sep 16, 2024 by aclum
berkeley-schema-fy24: make squeaky-clean all output begins with error message about missing file local/gold-study-ids.yaml backlog Issue not assigned to a sprint or not completed during a sprint. Needs to be reprioritized. bug Something isn't working cleanup unfinished wasn't completed during sprint, should be reprioritized and/or broken down to smaller issues X SMALL Less than 8 hours, less than 1 day
#2177 opened Sep 6, 2024 by eecavanna
@turbomam
10
Document process of merging nmdc-schema/main into berkeley-schema-fy24/main (in local slang: "backmerge") backlog Issue not assigned to a sprint or not completed during a sprint. Needs to be reprioritized. documentation Improvements or additions to documentation unfinished wasn't completed during sprint, should be reprioritized and/or broken down to smaller issues X SMALL Less than 8 hours, less than 1 day
#2170 opened Aug 23, 2024 by eecavanna
@turbomam
14
Delete .swp file from repo or document rationale for including it cleanup X SMALL Less than 8 hours, less than 1 day
#2168 opened Aug 23, 2024 by eecavanna
2
env_package should have a range of an Enum
#2167 opened Aug 22, 2024 by sujaypatil96
4
Slot name on PersonValue class needs to made more granular
#2166 opened Aug 22, 2024 by sujaypatil96
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